Rmarkdown partial example

Introduction

For example, you can make enlarge-able plots:

Graphical relationship

library(rmdpartials)
library(ggplot2)
x <- rnorm(100)
y <- x + rnorm(100) + 0.5 * x^2
curve <- qplot(x, y)
## Warning: `qplot()` was deprecated in ggplot2 3.4.0.
## This warning is displayed once every 8 hours.
## Call `lifecycle::last_lifecycle_warnings()` to see where this warning was
## generated.
enlarge_plot(curve, large_plot = curve + theme_classic(base_size = 20), plot_name = "myplot")

Regression

reg <- lm(y ~ x)
regression_diagnostics(reg)
x
(Intercept) 0.3592409
x 1.0755503

Values vs. fitted values.

Diagnostics (click to show)

Write a partial on the fly

x <- 5
y <- 9
partial(text = "`r x` `r y`")

5 9

Debug

Learn about environments in partials.

knit_child_debug()
Debug

Working directory

## [1] "/tmp/Rtmpfvlj7u/Rbuild1148e7c5beb/rmdpartials/vignettes"

needs_preview()

## [1] FALSE

is_interactive()

## [1] FALSE

Knitr Output.dir

## [1] "/tmp/Rtmpfvlj7u/Rbuild1148e7c5beb/rmdpartials/vignettes"

Child mode

## [1] TRUE

Viewer null

## [1] TRUE

In tmp dir

## [1] FALSE

knitr.in.progress

## [1] TRUE

rstudio.notebook.executing

## NULL

TESTTHAT_interactive

## [1] ""

TESTTHAT

## [1] ""

interactive

## [1] FALSE

objects in this environment

## [1] "is_interactive" "needs_preview"
knitr::opts_knit 
## $progress
## [1] FALSE
## 
## $verbose
## [1] FALSE
## 
## $eval.after
## [1] "fig.cap"  "fig.scap" "fig.alt" 
## 
## $base.dir
## NULL
## 
## $base.url
## NULL
## 
## $root.dir
## NULL
## 
## $child.path
## [1] ""
## 
## $upload.fun
## function (x) 
## x
## <bytecode: 0x5585e0f52058>
## <environment: namespace:base>
## 
## $global.device
## [1] FALSE
## 
## $global.par
## [1] FALSE
## 
## $concordance
## [1] FALSE
## 
## $documentation
## [1] 1
## 
## $self.contained
## [1] TRUE
## 
## $unnamed.chunk.label
## [1] "rmdpartial"
## 
## $highr.opts
## NULL
## 
## $label.prefix
##  table 
## "tab:" 
## 
## $latex.tilde
## NULL
## 
## $out.format
## [1] "markdown"
## 
## $child
## [1] TRUE
## 
## $parent
## [1] FALSE
## 
## $tangle
## [1] FALSE
## 
## $aliases
## NULL
## 
## $header
## highlight      tikz    framed 
##        ""        ""        "" 
## 
## $global.pars
## NULL
## 
## $rmarkdown.pandoc.from
## [1] "markdown+autolink_bare_uris+tex_math_single_backslash"
## 
## $rmarkdown.pandoc.to
## [1] "html"
## 
## $rmarkdown.pandoc.args
##  [1] "--embed-resources"                                                  
##  [2] "--standalone"                                                       
##  [3] "--section-divs"                                                     
##  [4] "--table-of-contents"                                                
##  [5] "--toc-depth"                                                        
##  [6] "2"                                                                  
##  [7] "--template"                                                         
##  [8] "/usr/local/lib/R/site-library/buildtools/rmd-template/template.html"
##  [9] "--highlight-style"                                                  
## [10] "pygments"                                                           
## 
## $rmarkdown.pandoc.id_prefix
## [1] ""
## 
## $rmarkdown.keep_md
## [1] FALSE
## 
## $rmarkdown.df_print
## [1] "default"
## 
## $rmarkdown.version
## [1] 2
## 
## $rmarkdown.runtime
## [1] "static"
## 
## $output.dir
## [1] "/tmp/Rtmpfvlj7u/Rbuild1148e7c5beb/rmdpartials/vignettes"
knitr::opts_chunk 
## $eval
## [1] TRUE
## 
## $echo
## [1] FALSE
## 
## $results
## [1] "markup"
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## $tidy
## [1] FALSE
## 
## $tidy.opts
## NULL
## 
## $collapse
## [1] FALSE
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## $prompt
## [1] FALSE
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## $comment
## [1] "##"
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## [1] TRUE
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## $size
## [1] "normalsize"
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## $background
## [1] "#F7F7F7"
## 
## $strip.white
## [1] TRUE
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## $cache
## [1] FALSE
## 
## $cache.path
## [1] "rmdpartials_cache/html/f080a7cff6_"
## 
## $cache.vars
## NULL
## 
## $cache.lazy
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## $dependson
## NULL
## 
## $autodep
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## $cache.rebuild
## [1] FALSE
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## $fig.keep
## [1] "high"
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## $fig.show
## [1] "asis"
## 
## $fig.align
## [1] "default"
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## $fig.path
## [1] "/tmp/Rtmpfvlj7u/Rbuild1148e7c5beb/rmdpartials/vignettes/rmdpartials_files/figure-html/f080a7cff6_"
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## $dev
## [1] "png"
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## $dev.args
## NULL
## 
## $dpi
## [1] 96
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## $fig.ext
## NULL
## 
## $fig.width
## [1] 7
## 
## $fig.height
## [1] 5
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## $fig.env
## [1] "figure"
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## $fig.cap
## NULL
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## $fig.scap
## NULL
## 
## $fig.lp
## [1] "fig:"
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## $fig.subcap
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## $fig.pos
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## $out.width
## NULL
## 
## $out.height
## NULL
## 
## $out.extra
## NULL
## 
## $fig.retina
## [1] 2
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## $external
## [1] TRUE
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## $sanitize
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## $interval
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## $aniopts
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## $warning
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## $error
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## $message
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## NULL
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## $child
## NULL
## 
## $engine
## [1] "R"
## 
## $split
## [1] FALSE
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## $include
## [1] TRUE
## 
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## [1] TRUE
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## LANG                    en_US.UTF-8
## LC_COLLATE              C
## LD_LIBRARY_PATH         /usr/lib/R/lib:/usr/lib/x86_64-linux-gnu:/usr/lib/jvm/default-java/lib/server:/usr/lib/R/lib:/usr/lib/x86_64-linux-gnu:/usr/lib/jvm/default-java/lib/server:/usr/lib/R/lib:/usr/lib/x86_64-linux-gnu:/usr/lib/jvm/default-java/lib/server
## LN_S                    ln -s
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## PDFLATEX                pdftinytex
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options() 
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## [1] TRUE
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## <environment: 0x5585de940490>
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